Portal
Suchergebnisse
Results list
Profile measurements of snow transport and micrometeorology at Mizuho Station in Antarctica
This data was collected at Mizuho Station (44.315°E, 70.71°S, 2230 m a.s.l.), East Antarctica, from **30 September to 22 November 2000** during the 41st Japanese Antarctic research expedition. Vertical profiles of the horizontal mass flux and particle number size distribution of drifting and blowing snow were measured in the lowest 10 m of the atmosphere using four **snow particle counters** (SPCs). Three 3-dimensional **ultrasonic anemometers** were deployed in the lowest 25 m of the atmosphere to record the wind velocity components and sonic temperature at a high frequency of 100 Hz. Additionally, an **automatic weather station** provided air temperature, relative humidity, air pressure, shortwave and longwave downward and upward radiation fluxes, surface temperature, snow temperatures at depths of 0.1 and 0.4 m below the surface, wind speed, and wind direction. The data is complemented by **weather observations** performed twice to eleven times per day by the Japanese Meteorological Agency. Most of the time, the lowest SPC was situated at a height of 0.05 or 0.1 m above the snow surface. During certain periods called profile runs, the height of the lowest SPC was systematically varied between 0.02 and 0.2 m to increase the vertical resolution of the measured profiles. The other SPC's were installed at fixed heights of 1.1, 3.1, and 9.6 m. During each profile run, the lowest SPC was kept at a specific height for approximately 10 min before changing the height. If the wind speed remained approximately constant throughout a profile run, the data was used to compute the average snow-transport profile in that period. In total, 24 of such average profiles were obtained. A part of these SPC measurements are discussed in Nishimura and Nemoto (2005). The ultrasonic anemometers were placed at heights of 0.3, 1, and 25 m. However, the height of the lowest ultrasonic anemometer was changed several times in the measurement period and ranged from 0.05 to 0.32 m. On top of that, 19 short periods (each lasting 15 to 160 min) were used to systematically vary the height of the lowest ultrasonic anemometer and thus increase the vertical resolution of the measured wind speed profile. Occasionally, drifting and blowing snow particles perturbed the ultrasonic measurement signal and electrically-charged particles caused an electric charge of the anemometers, leading to artifacts such as spikes and dropouts in the measured time series. These artifacts were largely removed and replaced by NaN, using the statistical spike removal algorithm of Mauder et al. (2013). However, the artifact removal was sometimes incomplete for the lowest anemometer because of very intense snow transport close to the surface. While temporal averages are barely affected by the artifacts, the high-frequency data of the lowest anemometer should be used carefully when computing turbulent fluxes using the eddy-covariance method. Further important explanations are provided in the file Readme.pdf in data resource '(a) Metadata'. References - Mauder, M., Cuntz, M., Drüe, C., Graf, A., Rebmann, C., Schmid, H.P., Schmidt, M., Steinbrecher, R. (2013). A strategy for quality and uncertainty assessment of long-term eddy-covariance measurements. Agric For Meteorol 169:122–135. https://doi.org/10.1016/j.agrformet.2012.09.006 - Nishimura, K., Nemoto M. (2005). Blowing snow at Mizuho station, Antarctica. Phil. Trans. R. Soc. A. 363: 1647–1662. https://doi.org/10.1098/rsta.2005.1599
Short-term Drainage Density Dynamics Dataset for the Erlenbach Catchment
The dataset contains time series of water levels, precipitation measured in the two sub-catchments of the Erlenbach catchment and its vicinity during summer and autumn 2021, as well as flowing drainage network lengths calculated for these areas using the CEASE method developed by the authors. Detailed description of the dataset is provided in the documentation.
Nanoplastics in forests: Exploring the effects of nanoplastics on forest soils and tree physiology (NanoPlast)
The fate of plastic in the environment is of global concern, because its production recently has increased strongly and it accumulates in terrestrial and aquatic ecosystems. Although some knowledge on its role in aquatic and terrestrial ecosystems was gained in the recent decade, hitherto very little is known about the impact of micro and nanoplastics in forest ecosystems. The aim of this pioneering project was to explore if nanoplastics are taken up by forest trees species through leaves or roots. In greenhouse experiments, we exposed leaves or roots of seedling of two forest trees species to solutions with highly 13C-labelled polystyrene nanoparticles (13C-nPS, 99 atom%) and examined if they were incorporated in different above- and belowground tissues. Treated part of the trees for both species showed significant 13C-enrichment, indicating that trees take up nanoparticles. However, the overall 13C signal strength in tissues that were not exposed to the 13C label remained low (Δδ13C<1‰) and was confined to a few seedlings, leaving it ambiguous whether nanoplastic transport occurs or not. We acknowledge that the new method developed might be not sensitive enough to unequivocally detect mechanisms of nanoplastic uptake and transport at environmentally realistic concentrations.
Soil sealing Barcelona and Milan different territorial levels
Dataset description<br /> This dataset is a recalculation of the Copernicus 2015 high resolution layer (HRL) of imperviousness density data (IMD) at different spatial/territorial scales for the case studies of Barcelona and Milan. The selected spatial/territorial scales are the following: * a) Barcelona city boundaries * b) Barcelona metropolitan area, Àrea Metropolitana de Barcelona (AMB) * c) Barcelona greater city (Urban Atlas) * d) Barcelona functional urban area (Urban Atlas) * e) Milan city boundaries * f) Milan metropolitan area, Piano Intercomunale Milanese (PIM) * g) Milan greater city (Urban Atlas) * h) Milan functional urban area (Urban Atlas)<br /> In each of the spatial/territorial scales listed above, the number of 20x20mt cells corresponding to each of the 101 values of imperviousness (0-100% soil sealing: 0% means fully non-sealed area; 100% means fully sealed area) is provided, as well as the converted measure into squared kilometres (km2). <br /> <br /> <br /> Dataset composition<br /> The dataset is provided in .csv format and is composed of: <br /> _IMD15_BCN_MI_Sources.csv_: Information on data sources <br /> _IMD15_BCN.csv_: This file refers to the 2015 high resolution layer of imperviousness density (IMD) for the selected territorial/spatial scales in Barcelona: * a) Barcelona city boundaries (label: bcn_city) * b) Barcelona metropolitan area, Àrea metropolitana de Barcelona (AMB) (label: bcn_amb) * c) Barcelona greater city (Urban Atlas) (label: bcn_grc) * d) Barcelona functional urban area (Urban Atlas) (label: bcn_fua)<br /> _IMD15_MI.csv_: This file refers to the 2015 high resolution layer of imperviousness density (IMD) for the selected territorial/spatial scales in Milan: * e) Milan city boundaries (label: mi_city) * f) Milan metropolitan area, Piano intercomunale milanese (PIM) (label: mi_pim) * g) Milan greater city (Urban Atlas) (label: mi_grc) * h) Milan functional urban area (Urban Atlas) (label: mi_fua)<br /> _IMD15_BCN_MI.mpk_: the shareable project in Esri ArcGIS format including the HRL IMD data in raster format for each of the territorial boundaries as specified in letter a)-h). <br /> Regarding the territorial scale as per letter f), the list of municipalities included in the Milan metropolitan area in 2016 was provided to me in 2016 from a person working at the PIM. <br /> In the IMD15_BCN.csv and IMD15_MI.csv, the following columns are included: * Level: the territorial level as defined above (a)-d) for Barcelona and e)-h) for Milan); * Value: the 101 values of imperviousness density expressed as a percentage of soil sealing (0-100%: 0% means fully non-sealed area; 100% means fully sealed area); * Count: the number of 20x20mt cells corresponding to a certain percentage of soil sealing or imperviousness; * Km2: the conversion of the 20x20mt cells into squared kilometres (km2) to facilitate the use of the dataset.<br /> <br /> <br /> Further information on the Dataset<br /> This dataset is the result of a combination between different databases of different types and that have been downloaded from different sources. Below, I describe the main steps in data management that resulted in the production of the dataset in an Esri ArcGIS (ArcMap, Version 10.7) project.<br /> 1. The high resolution layer (HRL) of the imperviousness density data (IMD) for 2015 has been downloaded from the official website of Copernicus. At the time of producing the dataset (April/May 2021), the 2018 version of the IMD HRL database was not yet validated, so the 2015 version was chosen instead. The type of this dataset is raster. 2. For both Barcelona and Milan, shapefiles of their administrative boundaries have been downloaded from official sources, i.e. the ISTAT (Italian National Statistical Institute) and the ICGC (Catalan Institute for Cartography and Geology). These files have been reprojected to match the IMD HRL projection, i.e. ETRS 1989 LAEA. 3. Urban Atlas (UA) boundaries for the Greater Cities (GRC) and Functional Urban Areas (FUA) of Barcelona and Milan have been checked and reconstructed in Esri ArcGIS from the administrative boundaries files by using a Eurostat correspondence table. This is because at the time of the dataset creation (April/May 2021), the 2018 Urban Atlas shapefiles for these two cities were not fully updated or validated on the Copernicus Urban Atlas website. Therefore, I had to re-create the GRC and FUA boundaries by using the Eurostat correspondence table as an alternative (but still official) data source. The use of the Eurostat correspondence table with the codes and names of municipalities was also useful to detect discrepancies, basically stemming from changes in municipality names and codes and that created inconsistent spatial features. When detected, these discrepancies have been checked with the ISTAT and ICGC offices in charge of producing Urban Atlas data before the final GRC and FUA boundaries were defined.<br /> Steps 2) and 3) were the most time consuming, because they required other tools to be used in Esri ArcGIS, like spatial joins and geoprocessing tools for shapefiles (in particular dissolve and area re-calculator in editing sessions) for each of the spatial/territorial scales as indicated in letters a)-h). <br /> Once the databases for both Barcelona and Milan as described in points 2) and 3) were ready (uploaded in Esri ArcGIS, reprojected and their correctness checked), they have been ‘crossed’ (i.e. clipped) with the IMD HRL as described in point 1) and a specific raster for each territorial level has been calculated. The procedure in Esri ArcGIS was the following: * Clipping: Arctoolbox > Data management tools > Raster > Raster Processing > Clip. The ‘input’ file is the HRL IMD raster file as described in point 1) and the ‘output’ file is each of the spatial/territorial files. The option "Use Input Features for Clipping Geometry (optional)” was selected for each of the clipping. * Delete and create raster attribute table: Once the clipping has been done, the raster has to be recalculated first through Arctoolbox > Data management tools > Raster > Raster properties > Delete Raster Attribute Table and then through Arctoolbox > Data management tools > Raster > Raster properties > Build Raster Attribute Table; the "overwrite" option has been selected. <br /> <br /> Other tools used for the raster files in Esri ArcGIS have been the spatial analyst tools (in particular, Zonal > Zonal Statistics). As an additional check, the colour scheme of each of the newly created raster for each of the spatial/territorial attributes as per letters a)-h) above has been changed to check the consistency of its overlay with the original HRL IMD file. However, a perfect match between the shapefiles as per letters a)-h) and the raster files could not be achieved since the raster files are composed of 20x20mt cells.<br /> The newly created attribute tables of each of the raster files have been exported and saved as .txt files. These .txt files have then been copied in the excel corresponding to the final published dataset.
Backward Trajectories
Backward trajectories were calculated from two positions: Davos Wolfgang (LON: 9.85361, LAT: 46.83551) and Weissfluhjoch (LON: 9.80646 LAT: 46.83304) for the time period February 2 until March 27 2019 using COSMO or ECMWF, respectively.
Tree-ring laser ablation data
This dataset contains the values of several chemical elements (Mg, Al, Si, S, K, Ca, Ti, Cr, Mn, Fe, Co, Ni, Cu, Zn, As, Sr, Tl, Pb, Bi) measured in the latewood of tree rings of Mongolian oak from Harbin, China, at a 5-year resolution. Due to the lack of a suitable reference material for wood, absolute concentration was not calculated, and the ratio between the chemical element and 13C was taken as proxy for the element signal. In Harbin, one of the largest cities and most important industrial centers in northeastern China, air quality monitoring systems were built only by the end of 2015 to meet the national requirements. Thus, dendrochemical analyses could be used as a tool to complement for the lack of air quality data over longer periods of time, allowing for the reconstruction of the temporal trend of trace metals. Our main scopes were to: (a) assess the chemical composition of Quercus mongolica Fisch. ex Ledeb. tree rings from Harbin using a recently developed system of laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS), (b) identify the main chemical elements which derived from air pollution and may be used as indicators over the period 1965–2020 in Harbin, while excluding those that were controlled by physiological processes in the tree, and (c) reconstruct the history of pollution in Harbin by comparing the tree-ring chemical composition of recent decades with that of previous decades, in trees growing in the highly polluted city of Harbin and in trees growing in a control site 90 km away from major pollution sources. Briefly, the temporal trend of some elements was influenced by physiological factors, by environmental factors such as pollution, or influenced by both. Mg, K, Zn, Cu, Ni, Pb, As, Sr and Tl showed changes in pollution levels over time.
Preprocessing Antarctic Weather Station (AWS) data in python
There are many sources providing atmospheric weather station data for the Antarctic continent. However, variable naming, timestamps and data types are highly variable between the different sources. The published python code intends to make processing of different AWS sources from Antarctica easier. For all datasets that are taken into account variables are renamed in a consistent way. Data from different sources can then be handled in one consistent python dictionary. The following data sources are taken into account: * AAD: Australian Antarctic Division (https://data.aad.gov.au/aws) * ACECRC: Antarctic Climate and Ecosystems Cooperative Research Centre by the Australian Antarctic Division * AMRC: Antarctic Meteorological Research Center (ftp://amrc.ssec.wisc.edu/pub/aws/q1h/) * BAS: British Antarctic Survey (ftp://ftp.bas.ac.uk/src/ANTARCTIC_METEOROLOGICAL_DATA/AWS/; https://legacy.bas.ac.uk/met/READER/ANTARCTIC_METEOROLOGICAL_DATA/) * CLIMANTARTIDE: Antarctic Meteo-Climatological Observatory by the italian National Programme of Antarctic Research (https://www.climantartide.it/dataaccess/index.php?lang=en) * IMAU: Institute for Marine and Atmospheric research Utrecht (Lazzara et al., 2012), https://www.projects.science.uu.nl/iceclimate/aws/antarctica.ph * JMA: Japan Meteorological Agency (https://www.data.jma.go.jp/antarctic/datareport/index-e.html) * NOAA: National Oceanic and Atmospheric Administration (https://gml.noaa.gov/aftp/data/meteorology/in-situ/spo/) * Other/AWS_PE: Princess Elisabeth (PE), KU Leuven, Prof. N. van Lipzig, personal communication * Other/DDU_transect: Stations D-17 and D-47 (in transect between Dumont d’Urville and Dome C, Amory, 2020) * PANGAEA: World Data Center (e.g. König-Langlo, 2012) Important notes * Information about data sources is available. Some downloading scripts are included in the provided code. However, users should make sure to comply with the data providers terms and conditions. * Given changing download options of the differnent institutions the above links may not permanently work and data has to be retrieved by the user of this dataset. * No quality control is applied in the provided preprocessing software - quality control is up to the user of the datasets. Some dataset are quality controlled by the owner. Acknowledgements -------------------------- We thank all the data providers for making the data publicly available or providing them upon request. Full acknowledgements can be found in Gerber et al., submitted. References --------------- Amory, C. (2020). “Drifting-snow statistics from multiple-year autonomous measurements in Adélie Land, East Antarctica”. The Cryosphere, 1713–1725. doi: 10.5194/tc-14-1713-2020 Gerber, F., Sharma, V. and Lehning, M.: CRYOWRF - a validation and the effect of blowing snow on the Antarctic SMB, JGR - Atmospheres, submitted. König-Langlo, G. (2012). “Continuous meteorological observations at Neumayer station (2011-01)”. Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, PANGAEA, doi: 10.1594/PANGAEA. 775173
snowBedFoam: an OpenFOAM Eulerian-Lagrangian solver for modelling snow transport
snowBedFoam 1.0. is a snow transport solver implemented in the computational fluid dynamics software OpenFOAM. It is adapted from the standard multi-phase flow solver DPMFoam for application in snow-influenced environments. To simulate aeolian snow transport, snowBedFoam 1.0. handles coupled Eulerian–Lagrangian phases, which involve a finite number of particles (snow) spread in a continuous phase (air). The snow erosion and deposition are modelled through physics-based equations similar to the ones employed in the well-established LES-Lagrangian Stochastic Model (Comola and Lehning, 2017 ; Sharma et al., 2018 ; Melo et al., 2022). This modelling approach is computationally intensive and thus adapted to simulate snow movement and distribution on small scale terrain. First, snowBedFoam 1.0. was applied to topographical data collected on Arctic sea ice during the MOSAiC expedition (Clemens-Sewall, 2021). Together with atmospheric data from the MOSAiC Met City (Shupe et al., 2021) used for the fluid forcing, the model was able to accurately simulate the zones of erosion and deposition of snow along a complex ice ridge structure (Hames et al., 2022). Second, snowBedFoam 1.0. was used to simulate the snow distribution around the German Antarctic research station Neumayer Station III. The effect of snow properties, fluid forcing and aerodynamic structures on the snow accumulation were assessed. snowBedFoam 1.0 was implemented in 2 different OpenFOAM versions, namely OpenFOAM-2.3.0 and OpenFOAM-5.0. The latter offers more options for turbulence models and boundary conditions. The fundamental model equations were not changed from one implementation to the other, thus both still correspond to snowBedFoam 1.0. The two branches are called snowBedFoam-v1-2.3.0 (OpenFOAM-2.3.0) and snowBedFoam-v1-5.0 (OpenFOAM-5.0). The core codes of snowBedFoam 1.0. are directly accessible on the WSL/SLF GitLab repository (more details in the Resources section).
Avalanche outlines February and March 1999 from aerial imagery
**for English see below** ******************************************************************************* <br/> </br> Datenbeschrieb <br/> </br> Dieser Datensatz enthält die **Umrisse der 11'120 Lawinen** die aus schwarzweiss Luftbildern, welche zwischen dem 25.2.1999 und dem 1.3.1999 aufgenommen wurden, kartiert wurden. Die Lawinenumrisse haben verschiedene Attribute welche im **beigelegten Beispielschlüssel** beschrieben sind (Beispielschluessel_1999_d.pdf). Es gibt drei Shapefiles: * **avalanches1999_endversion1.shp**: die kartierten Lawinen (für Attribute siehe Beispielschlüssel!) * **area_images_1999.shp**: Fläche die durch die Luftbilder abgedeckt wurde * **clouds_1999.shp**: grobe Umrisse der Wolken in den Bildern Bildverfügbarkeit: Die entzerrten Luftbilder können von der [Swisstopo](https://s.geo.admin.ch/rpq3hufnb588) einzeln über den Downloadlink heruntergeladen werden (herzlichen Dank an Holger Heisig für die Prozessierung und ans BAFU für die Finanzierung der Prozessierung!!). Über "Erweiterte Werkzeuge"/ "Datei importieren" können die Bilder nach hereinziehen des Orthofotolinks direkt im map.geo.admin.ch angezeigt werden. Weiterführende Litertaur: Details zu den Luftbildern und zur Kartierung, sowie eine kleine Analyse und Empfehlungen zur Verwendung der Daten finden sich unter - Hafner, E., Margreth, S., and Bühler, Y.: Die grossflächigen Lawinenkartierungen 1999, 2018 und 2019: ein Überblick für die Praxis, FAN Agenda, 1/2025, 15 - 21, 2025. - Dal, F. J., Hafner, E. D., Peters, T., Narnhofer, D., Caye Daudt, R., Heisig, H., & Bühler, Y. (2024). Automated snow avalanche mapping with deep learning in aerial imagery from the extreme avalanche winter of 1999. In K. Gisnås, P. Gauer, H. Dahle, M. Eckerstorfer, A. Mannberg, & K. Müller (Eds.), Proceedings of the international Snow Science Workshop 2024 (pp. 1264-1271). Norwegian Geotechnical Institute. - Hafner, E. D., Techel, F., Heisig, H., Dal, J. F., & Bühler, Y. (2024). Remotely sensed avalanche activity during three extreme avalanche periods in Switzerland. In K. Gisnås, P. Gauer, H. Dahle, M. Eckerstorfer, A. Mannberg, & K. Müller (Eds.), Proceedings of the international Snow Science Workshop 2024 (pp. 1222-1229). Norwegian Geotechnical Institute. ******************************************************************************* <br/> </br> Data description <br/> </br> This dataset contains the **outlines of 11'120 avalanches** mapped from panchromatic aerial imagery taken between February 25, 1999 and March 1, 1999. The avalanche outlines have various attributes which are described in the **attached example key** (ExampleKey_AvalMapping_1999_e.pdf). There are three shapefiles: * **avalanches1999_endversion1.shp**: the mapped avalanches (for attributes see example key!) **area_images_1999.shp**: Area covered by the aerial images **clouds_1999.shp**: rough outlines of the clouds in the images Image availability: The rectified aerial images can be downloaded individually from [Swisstopo](https://s.geo.admin.ch/bg6beetinfdc) via the download link (many thanks to Holger Heisig for processing and to BAFU for financing the processing!!). The images can be displayed directly in map.geo.admin.ch via “Advanced tools”/“Import file” after dragging in the orthophoto link. Further Reading: Details on the aerial images and mapping, as well as a brief analysis and tips on using the data can be found at - Hafner, E., Margreth, S., and Bühler, Y.: Die grossflächigen Lawinenkartierungen 1999, 2018 und 2019: ein Überblick für die Praxis, FAN Agenda, 1/2025, 15 - 21, 2025. - Dal, F. J., Hafner, E. D., Peters, T., Narnhofer, D., Caye Daudt, R., Heisig, H., & Bühler, Y. (2024). Automated snow avalanche mapping with deep learning in aerial imagery from the extreme avalanche winter of 1999. In K. Gisnås, P. Gauer, H. Dahle, M. Eckerstorfer, A. Mannberg, & K. Müller (Eds.), Proceedings of the international Snow Science Workshop 2024 (pp. 1264-1271). Norwegian Geotechnical Institute. - Hafner, E. D., Techel, F., Heisig, H., Dal, J. F., & Bühler, Y. (2024). Remotely sensed avalanche activity during three extreme avalanche periods in Switzerland. In K. Gisnås, P. Gauer, H. Dahle, M. Eckerstorfer, A. Mannberg, & K. Müller (Eds.), Proceedings of the international Snow Science Workshop 2024 (pp. 1222-1229). Norwegian Geotechnical Institute.
Environmental DNA Marine France LaPerouse 2019
Fish environmental DNA data set collected in the shallow seamount of La Pérouse located between Madagascar and Réunion Island In 2019, we sampled the shallow seamount of La Pérouse, located between Madagascar and Réunion Island in the WIO. La Pérouse is an extinct volcano with a summit depth at 60 m below the sea surface. The plateau of the summit has a maximum length of 12 km and a maximum width of 4 km. One side of the seamount might have collapsed in the past, leading to a less common crescent-shaped summit. The abyssal plains that surround this isolated pinnacle are at a depth of 5000 m. Despite its proximity to Réunion Island (160 km northwest), La Pérouse and its surroundings are still poorly studied. To sample eDNA in this location we used a submersible pump (Subspace, Geneva, Switzerland; nominal flow of ~ 1.0 L/min) to collect samples at various depths during close circuit rebreather dives. The pump has an internal battery and can be activated underwater allowing in situ filtration directly at the targeted habitat and depth. The filtration lasted for 30 min to collect a total water volume of ~ 30 L. During close circuit rebreather dives, water samples from various depths, ranging from 60 to 140 m below the sea surface, were collected using only the Submersible method (eight stations: no replicates). Out of the eight water samples, six were collected during the day, while two were collected at night (IS2_1 at 62 m and IS7_1 at 100–125 m). We applied this filtration protocols to collect and filter water throughout a VigiDNA® 0.2 μM cross-flow filtration capsule (SPYGEN, le Bourget du Lac, France) using disposable sterile tubing for each filtration capsule. After the filtration process, the remaining water in the capsules was emptied. The capsules were then filled with 80 ml of lysis conservation buffer (CL1 buffer SPYGEN, le Bourget du Lac, France) and stored at room temperature in the dark. At La Pérouse, a total of eight water samples were collected during the MONT LA PÉROUSE expedition (https://gombessa-expeditions.com/mont-la-perouse/) on board the ship La Curieuse to the seamount La Pérouse from October 27th to November 5th 2019. We followed a strict contamination control protocol in both field and laboratory stages. Each water sample processing included the use of disposable gloves and single-use filtration equipment to avoid any risk of contamination. Libraries were prepared with ligation using the MetaFast protocol (Fasteris). Data content: * rawdata/: contains the raw reads for each individual sample. One archive contains the paired-end reads specified by the _R1 or _R2 suffix as well as individually tagged PCR replicates (if available) together with an archive containing all extraction and PCR blank samples of the library. Reads have been demultiplexed using cutadapt but not trimmed, individual demultiplexing tags and primers remain present in the sequences. * taxadata/: contains the table with all detected taxonomy for each sample after bioinformatic processing (see Polanco et al. 2020 for details; https://doi.org/10.1002/edn3.140) and associated field metadata. * metadata/: contains two metadata files, one related to the data collected in the field for each filter, and the second related to the sequencing process in the lab (including the tag sequence, library name, and marker information for each sample)